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Teruo Fujii
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Proceedings Papers
. isal2021, ALIFE 2021: The 2021 Conference on Artificial Life111, (July 18–22, 2021) 10.1162/isal_a_00454
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In this article, we implement a localized autocatalytic molecular system inside a closed microfluidic chamber. Due to the enzymatic nature of the catalytic process, a variety of parasitic species eventually emerge and compete with the legitimate molecular process for fuel. The behaviors observed range from the creation of large stable structures to that of small diffusing particles. Those results, along with the modularity of the molecular system, show that the proposed experimental setup can be used safely for further study of the evolution of parasitic behaviors at the molecular scale.
Proceedings Papers
. isal2020, ALIFE 2020: The 2020 Conference on Artificial Life420-422, (July 13–18, 2020) 10.1162/isal_a_00293
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We design and implement a temperature-based input mechanism for molecular reservoir computing. Using temperature allows us to interact with the system while keeping it chemically closed, a crucial step to use the reservoir computing approach with standard laboratory equipment. We implement the reservoir with a robust molecular oscillator, subjecting it to sudden temperature variations and monitoring its response with fluorescent reporters. We then train in-silico neural networks on the fluorescence traces to predict the inputted temperature profiles. We reach an average of 87% accuracy for a single layer and 91% for two layers, showing the potential of such reservoir.
Proceedings Papers
. ecal2013, ECAL 2013: The Twelfth European Conference on Artificial Life1143-1150, (September 2–6, 2013) 10.1162/978-0-262-31709-2-ch174
Proceedings Papers
. ecal2011, ECAL 2011: The 11th European Conference on Artificial Life100, (August 8–12, 2011) 10.7551/978-0-262-29714-1-ch100